General Information
Overview
Data ID:
SAID057
GSE:
GSE171161
GSM:
GSM5220141
Species:
Mus musculus
Disease:
Tissue:
Characteristics
mouse strain: C57BL/6
disease state: Melanoma-associated vitiligo
tissue: Skin
age: 16 weeks
Experiment Information
Title:
Single cell RNA-seq of tumor antigen specific CD8 Tissue Resident Memory (Trm) Cells
Summary:
Purpose: To characterize the tumor-specific TRM cells in LNs, skin, lung and liver in mice with melanoma-associated vitiligo (MAV). scRNAseq was performed to identify populations of CD8 T cells with TRM transcriptional characteristics.Methods: CD8+Thy1.1+ T cells were sorted from DLN, skin lung and liver of MAV mice and scRNA-sequencedResults: Heterogenouse CD8 memory populations with both circulatating and resident phenotypes were identified.Conclusions: Tumor-specific CD8 T cells form TRM responses in tumor-draining LNs.
Overall Design:
scRNA-seq of CD8+Thy1.1+ T cells from DLN, skin, lung and liver of MAV mice 45 days post tumor surgery.
Cell Clustering
DEG Results



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